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ICPP
2006
IEEE
15 years 9 months ago
Data Sharing Pattern Aware Scheduling on Grids
These days an increasing number of applications, especially in science and engineering, are dealing with a massive amount of data; hence they are dataintensive. Bioinformatics, da...
Young Choon Lee, Albert Y. Zomaya
IMSCCS
2006
IEEE
15 years 9 months ago
Combining Comparative Genomics with de novo Motif Discovery to Identify Human Transcription Factor DNA-Binding Motifs
Background: As more and more genomes are sequenced, comparative genomics approaches provide a methodology for identifying conserved regulatory elements that may be involved in gen...
Linyong Mao, W. Jim Zheng
IMSCCS
2006
IEEE
15 years 9 months ago
Clustering of Gene Expression Data: Performance and Similarity Analysis
Background: DNA Microarray technology is an innovative methodology in experimental molecular biology, which has produced huge amounts of valuable data in the profile of gene expre...
Longde Yin, Chun-Hsi Huang
SSDBM
2006
IEEE
163views Database» more  SSDBM 2006»
15 years 9 months ago
ACache: Using Caching to Improve the Performance of Multiple Sequence Alignments
Multiple sequence alignment represents a class of powerful bioinformatics tools with many uses in computational biology ranging from discovery of characteristic motifs and conserv...
Xun Tu, Kajal T. Claypool, Cindy X. Chen
PLDI
2006
ACM
15 years 9 months ago
Context-sensitive domain-independent algorithm composition and selection
Progressing beyond the productivity of present-day languages appears to require using domain-specific knowledge. Domain-specific languages and libraries (DSLs) proliferate, but ...
Troy A. Johnson, Rudolf Eigenmann