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BMCBI
2008
114views more  BMCBI 2008»
15 years 3 months ago
Combining classifiers for improved classification of proteins from sequence or structure
Background: Predicting a protein's structural or functional class from its amino acid sequence or structure is a fundamental problem in computational biology. Recently, there...
Iain Melvin, Jason Weston, Christina S. Leslie, Wi...
CORR
2010
Springer
175views Education» more  CORR 2010»
15 years 3 months ago
Incorporating Side Information in Probabilistic Matrix Factorization with Gaussian Processes
Probabilistic matrix factorization (PMF) is a powerful method for modeling data associated with pairwise relationships, finding use in collaborative filtering, computational biolo...
Ryan Prescott Adams, George E. Dahl, Iain Murray
ALMOB
2006
97views more  ALMOB 2006»
15 years 3 months ago
The approximability of the String Barcoding problem
The String Barcoding (SBC) problem, introduced by Rash and Gusfield (RECOMB, 2002), consists in finding a minimum set of substrings that can be used to distinguish between all mem...
Giuseppe Lancia, Romeo Rizzi
BMCBI
2006
180views more  BMCBI 2006»
15 years 3 months ago
Building multiclass classifiers for remote homology detection and fold recognition
Motivation Protein remote homology prediction and fold recognition are central problems in computational biology. Supervised learning algorithms based on support vector machines a...
Huzefa Rangwala, George Karypis
137
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JMLR
2006
156views more  JMLR 2006»
15 years 3 months ago
Large Scale Multiple Kernel Learning
While classical kernel-based learning algorithms are based on a single kernel, in practice it is often desirable to use multiple kernels. Lanckriet et al. (2004) considered conic ...
Sören Sonnenburg, Gunnar Rätsch, Christi...