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IPPS
2007
IEEE
15 years 4 months ago
Analysis of a Computational Biology Simulation Technique on Emerging Processing Architectures
1 Multi-paradigm, multi-threaded and multi-core computing devices available today provide several orders of magnitude performance improvement over mainstream microprocessors. These...
Jeremy S. Meredith, Sadaf R. Alam, Jeffrey S. Vett...
COMPGEOM
2007
ACM
15 years 1 months ago
Computing the exact arrangement of circles on a sphere, with applications in structural biology: video
The Bentley-Ottmann (BO) algorithm, initially designed to report the intersection points of line-segments in the plane, is the prototypical sweep-line algorithm. This video presen...
Frédéric Cazals, Sébastien Lo...
ALIFE
2004
14 years 9 months ago
Avida: A Software Platform for Research in Computational Evolutionary Biology
The Avida digital evolution platform is a software tool used to perform experimental evolution research with self-replicating computer programs ("digital organisms"). Av...
Charles Ofria, Claus O. Wilke
IJON
2000
69views more  IJON 2000»
14 years 9 months ago
PARALLEL NEUROSYS: A system for the simulation of very large networks of biologically accurate neurons on parallel computers
We present a software package for the simulation of very large neuronal networks on parallel computers. The package can be run on any system with an implementation of the Message ...
Peter Pacheco, Marcelo Camperi, Toshi Uchino
IJCNN
2007
IEEE
15 years 4 months ago
Learning Methods for DNA Binding in Computational Biology
Mark A. Kon, Dustin T. Holloway, Yue Fan, Chaitany...