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» Biological Network Inference Using Redundancy Analysis
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94
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BMCBI
2006
101views more  BMCBI 2006»
14 years 9 months ago
SynTReN: a generator of synthetic gene expression data for design and analysis of structure learning algorithms
Background: The development of algorithms to infer the structure of gene regulatory networks based on expression data is an important subject in bioinformatics research. Validatio...
Tim Van den Bulcke, Koen Van Leemput, Bart Naudts,...
BMCBI
2005
97views more  BMCBI 2005»
14 years 9 months ago
The yeast kinome displays scale free topology with functional hub clusters
Background: The availability of interaction databases provides an opportunity for researchers to utilize immense amounts of data exclusively in silico. Recently there has been an ...
Robin E. C. Lee, Lynn A. Megeney
88
Voted
BMCBI
2010
167views more  BMCBI 2010»
14 years 9 months ago
Inference of sparse combinatorial-control networks from gene-expression data: a message passing approach
Background: Transcriptional gene regulation is one of the most important mechanisms in controlling many essential cellular processes, including cell development, cell-cycle contro...
Marc Bailly-Bechet, Alfredo Braunstein, Andrea Pag...
RECOMB
2010
Springer
14 years 11 months ago
An Algorithmic Framework for Predicting Side-Effects of Drugs
Abstract. One of the critical stages in drug development is the identification of potential side effects for promising drug leads. Large scale clinical experiments aimed at discove...
Nir Atias, Roded Sharan
IMC
2010
ACM
14 years 7 months ago
Flowroute: inferring forwarding table updates using passive flow-level measurements
The reconvergence of routing protocols in response to changes in network topology can impact application performance. While improvements in protocol specification and implementati...
Amogh Dhamdhere, Lee Breslau, Nick G. Duffield, Ch...