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» Biological Network Inference Using Redundancy Analysis
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CIKM
2011
Springer
12 years 6 months ago
Joint inference for cross-document information extraction
Previous information extraction (IE) systems are typically organized as a pipeline architecture of separated stages which make independent local decisions. When the data grows bey...
Qi Li, Sam Anzaroot, Wen-Pin Lin, Xiang Li, Heng J...
BMCBI
2010
137views more  BMCBI 2010»
13 years 6 months ago
Biana: a software framework for compiling biological interactions and analyzing networks
Background: The analysis and usage of biological data is hindered by the spread of information across multiple repositories and the difficulties posed by different nomenclature sy...
Javier Garcia-Garcia, Emre Guney, Ramon Aragues, J...
BMCBI
2007
153views more  BMCBI 2007»
13 years 6 months ago
A new pairwise kernel for biological network inference with support vector machines
Background: Much recent work in bioinformatics has focused on the inference of various types of biological networks, representing gene regulation, metabolic processes, protein-pro...
Jean-Philippe Vert, Jian Qiu, William Stafford Nob...
AB
2008
Springer
14 years 19 days ago
Algorithms for Inference, Analysis and Control of Boolean Networks
Boolean networks (BNs) are known as a mathematical model of genetic networks. In this paper, we overview algorithmic aspects of inference, analysis and control of BNs while focusin...
Tatsuya Akutsu, Morihiro Hayashida, Takeyuki Tamur...