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» Biological Network Inference Using Redundancy Analysis
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KDD
2008
ACM
121views Data Mining» more  KDD 2008»
15 years 10 months ago
Reconstructing chemical reaction networks: data mining meets system identification
We present an approach to reconstructing chemical reaction networks from time series measurements of the concentrations of the molecules involved. Our solution strategy combines t...
Yong Ju Cho, Naren Ramakrishnan, Yang Cao
BMCBI
2005
152views more  BMCBI 2005»
14 years 9 months ago
GeneKeyDB: A lightweight, gene-centric, relational database to support data mining environments
Background: The analysis of biological data is greatly enhanced by existing or emerging databases. Most existing databases, with few exceptions are not designed to easily support ...
S. A. Kirov, X. Peng, E. Baker, D. Schmoyer, B. Zh...
RAID
2000
Springer
15 years 1 months ago
Adaptive, Model-Based Monitoring for Cyber Attack Detection
Inference methods for detecting attacks on information resources typically use signature analysis or statistical anomaly detection methods. The former have the advantage of attack...
Alfonso Valdes, Keith Skinner
RECOMB
2010
Springer
14 years 8 months ago
Predicting Nucleosome Positioning Using Multiple Evidence Tracks
Abstract. We describe a probabilistic model, implemented as a dynamic Bayesian network, that can be used to predict nucleosome positioning along a chromosome based on one or more g...
Sheila M. Reynolds, Zhiping Weng, Jeff A. Bilmes, ...
BMCBI
2008
259views more  BMCBI 2008»
14 years 10 months ago
DISCLOSE : DISsection of CLusters Obtained by SEries of transcriptome data using functional annotations and putative transcripti
Background: A typical step in the analysis of gene expression data is the determination of clusters of genes that exhibit similar expression patterns. Researchers are confronted w...
Evert-Jan Blom, Sacha A. F. T. van Hijum, Klaas J....