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DASFAA
2010
IEEE
195views Database» more  DASFAA 2010»
15 years 6 months ago
BIDEL: An XML-Based System for Effective Fast Change Detection of Genomic and Proteomic Data
Abstract. A key issue to address in biological data integration is how to detect changes to the underlying biological data sources. In this demonstration, we present a novel system...
Song Yang, Sourav S. Bhowmick
BMCBI
2007
166views more  BMCBI 2007»
15 years 3 months ago
PathFinder: mining signal transduction pathway segments from protein-protein interaction networks
Background: A Signal transduction pathway is the chain of processes by which a cell converts an extracellular signal into a response. In most unicellular organisms, the number of ...
Gürkan Bebek, Jiong Yang
BMCBI
2007
176views more  BMCBI 2007»
15 years 3 months ago
Correlation-maximizing surrogate gene space for visual mining of gene expression patterns in developing barley endosperm tissue
Background: Micro- and macroarray technologies help acquire thousands of gene expression patterns covering important biological processes during plant ontogeny. Particularly, fait...
Marc Strickert, Nese Sreenivasulu, Björn Usad...
ALMOB
2006
102views more  ALMOB 2006»
15 years 3 months ago
Mining, compressing and classifying with extensible motifs
Background: Motif patterns of maximal saturation emerged originally in contexts of pattern discovery in biomolecular sequences and have recently proven a valuable notion also in t...
Alberto Apostolico, Matteo Comin, Laxmi Parida
KDD
2001
ACM
142views Data Mining» more  KDD 2001»
16 years 3 months ago
TreeDT: gene mapping by tree disequilibrium test
We introduce and evaluate TreeDT, a novel gene mapping method which is based on discovering and assessing tree-like patterns in genetic marker data. Gene mapping aims at discoveri...
Petteri Sevon, Hannu Toivonen, Vesa Ollikainen