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GBRPR
2007
Springer
15 years 8 months ago
Generalized vs Set Median Strings for Histogram-Based Distances: Algorithms and Classification Results in the Image Domain
We compare different statistical characterizations of a set of strings, for three different histogram-based distances. Given a distance, a set of strings may be characterized by it...
Christine Solnon, Jean-Michel Jolion
BMCBI
2008
124views more  BMCBI 2008»
15 years 4 months ago
Inferring modules of functionally interacting proteins using the Bond Energy Algorithm
Background: Non-homology based methods such as phylogenetic profiles are effective for predicting functional relationships between proteins with no considerable sequence or struct...
Ryosuke Watanabe, Enrique Morett, Edgar E. Vallejo
157
Voted
ALMOB
2006
109views more  ALMOB 2006»
15 years 4 months ago
A novel functional module detection algorithm for protein-protein interaction networks
Background: The sparse connectivity of protein-protein interaction data sets makes identification of functional modules challenging. The purpose of this study is to critically eva...
Woochang Hwang, Young-Rae Cho, Aidong Zhang, Mural...
128
Voted
ESA
2000
Springer
73views Algorithms» more  ESA 2000»
15 years 7 months ago
K-D Trees Are Better when Cut on the Longest Side
We show that a popular variant of the well known k-d tree data structure satisfies an important packing lemma. This variant is a binary spatial partitioning tree T defined on a set...
Matthew Dickerson, Christian A. Duncan, Michael T....
CPM
2005
Springer
97views Combinatorics» more  CPM 2005»
15 years 9 months ago
On the Complexity of Sparse Exon Assembly
Gene structure prediction is one of the most important problems in computational molecular biology. It involves two steps: the first is finding the evidence (e.g. predicting spl...
Carmel Kent, Gad M. Landau, Michal Ziv-Ukelson