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» Can Parallel Algorithms Enhance Serial Implementation
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ASAP
2003
IEEE
124views Hardware» more  ASAP 2003»
15 years 7 months ago
Arbitrary Bit Permutations in One or Two Cycles
Symmetric-key block ciphers encrypt data, providing data confidentiality over the public Internet. For inter-operability reasons, it is desirable to support a variety of symmetric...
Zhijie Shi, Xiao Yang, Ruby B. Lee
103
Voted
BMCBI
2006
130views more  BMCBI 2006»
15 years 2 months ago
MicroTar: predicting microRNA targets from RNA duplexes
Background: The accurate prediction of a comprehensive set of messenger RNAs (targets) regulated by animal microRNAs (miRNAs) remains an open problem. In particular, the predictio...
Rahul Thadani, Martti T. Tammi
IWOMP
2007
Springer
15 years 8 months ago
Support for Fine Grained Dependent Tasks in OpenMP
OpenMP is widely used for shared memory parallel programming and is especially useful for the parallelisation of loops. When it comes to task parallelism, however, OpenMP is less p...
Oliver Sinnen, Jsun Pe, Alexander Vladimirovich Ko...
118
Voted
PPOPP
2006
ACM
15 years 8 months ago
Collective communication on architectures that support simultaneous communication over multiple links
Traditional collective communication algorithms are designed with the assumption that a node can communicate with only one other node at a time. On new parallel architectures such...
Ernie Chan, Robert A. van de Geijn, William Gropp,...
IPPS
2002
IEEE
15 years 7 months ago
Optimal Remapping in Dynamic Bulk Synchronous Computations via a Stochastic Control Approach
A bulk synchronous computation proceeds in phases that are separated by barrier synchronization. For dynamic bulk synchronous computations that exhibit varying phase-wise computat...
Gang George Yin, Cheng-Zhong Xu, Le Yi Wang