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CGF
2010
146views more  CGF 2010»
14 years 11 months ago
Pathline: A Tool For Comparative Functional Genomics
Biologists pioneering the new field of comparative functional genomics attempt to infer the mechanisms of gene regulation by looking for similarities and differences of gene activ...
Miriah D. Meyer, Bang Wong, Mark P. Styczynski, Ta...
BMCBI
2011
14 years 6 months ago
Flexible taxonomic assignment of ambiguous sequencing reads
Background: To characterize the diversity of bacterial populations in metagenomic studies, sequencing reads need to be accurately assigned to taxonomic units in a given reference ...
José Carlos Clemente, Jesper Jansson, Gabri...
ISBI
2008
IEEE
16 years 11 days ago
Chromosome pairing for karyotyping purposes using mutual information
Cytogenetics is the preferred tool in the diagnosis of genetic diseases such as leukemia and detection of aquired chromosomal abnormalities, such as translocations, deletions, mon...
Artem Khmelinskii, João Sanches, Rodrigo Ve...
RECOMB
2002
Springer
15 years 12 months ago
Monotony of surprise and large-scale quest for unusual words
The problem of characterizing and detecting recurrent sequence patterns such as substrings or motifs and related associations or rules is variously pursued in order to compress da...
Alberto Apostolico, Mary Ellen Bock, Stefano Lonar...
STOC
2002
ACM
111views Algorithms» more  STOC 2002»
15 years 12 months ago
The price of anarchy is independent of the network topology
We study the degradation in network performance caused by the selfish behavior of noncooperative network users. We consider a model of selfish routing in which the latency experie...
Tim Roughgarden