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» Classification of microarray data using gene networks
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124
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BMCBI
2010
102views more  BMCBI 2010»
15 years 3 months ago
Quantized correlation coefficient for measuring reproducibility of ChIP-chip data
Background: Chromatin immunoprecipitation followed by microarray hybridization (ChIP-chip) is used to study protein-DNA interactions and histone modifications on a genome-scale. T...
Shouyong Peng, Mitzi I. Kuroda, Peter J. Park
BMCBI
2005
201views more  BMCBI 2005»
15 years 3 months ago
Principal component analysis for predicting transcription-factor binding motifs from array-derived data
Background: The responses to interleukin 1 (IL-1) in human chondrocytes constitute a complex regulatory mechanism, where multiple transcription factors interact combinatorially to...
Yunlong Liu, Matthew P. Vincenti, Hiroki Yokota
JCST
2008
124views more  JCST 2008»
15 years 3 months ago
Clustering by Pattern Similarity
The task of clustering is to identify classes of similar objects among a set of objects. The definition of similarity varies from one clustering model to another. However, in most ...
Haixun Wang, Jian Pei
SAC
2008
ACM
15 years 2 months ago
Bayesian inference for a discretely observed stochastic kinetic model
The ability to infer parameters of gene regulatory networks is emerging as a key problem in systems biology. The biochemical data are intrinsically stochastic and tend to be observ...
Richard J. Boys, Darren J. Wilkinson, Thomas B. L....
114
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NN
2006
Springer
153views Neural Networks» more  NN 2006»
15 years 3 months ago
An incremental network for on-line unsupervised classification and topology learning
This paper presents an on-line unsupervised learning mechanism for unlabeled data that are polluted by noise. Using a similarity thresholdbased and a local error-based insertion c...
Shen Furao, Osamu Hasegawa