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» Clustering Genes Using Heterogeneous Data Sources
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HIPC
2009
Springer
15 years 1 months ago
Comparing the performance of clusters, Hadoop, and Active Disks on microarray correlation computations
Abstract--Microarray-based comparative genomic hybridization (aCGH) offers an increasingly fine-grained method for detecting copy number variations in DNA. These copy number variat...
Jeffrey A. Delmerico, Nathanial A. Byrnes, Andrew ...
BMCBI
2010
155views more  BMCBI 2010»
15 years 3 months ago
A flexible R package for nonnegative matrix factorization
Background: Nonnegative Matrix Factorization (NMF) is an unsupervised learning technique that has been applied successfully in several fields, including signal processing, face re...
Renaud Gaujoux, Cathal Seoighe
BMCBI
2007
153views more  BMCBI 2007»
15 years 3 months ago
An exploration of alternative visualisations of the basic helix-loop-helix protein interaction network
Background: Alternative representations of biochemical networks emphasise different aspects of the data and contribute to the understanding of complex biological systems. In this ...
Brian J. Holden, John W. Pinney, Simon C. Lovell, ...
134
Voted
SEMWEB
2007
Springer
15 years 9 months ago
YARS2: A Federated Repository for Querying Graph Structured Data from the Web
We present the architecture of an end-to-end semantic search engine that uses a graph data model to enable interactive query answering over structured and interlinked data collecte...
Andreas Harth, Jürgen Umbrich, Aidan Hogan, S...
161
Voted
SIGMOD
2012
ACM
230views Database» more  SIGMOD 2012»
13 years 5 months ago
Pay-as-you-go data integration for linked data: opportunities, challenges and architectures
Linked Data (LD) provides principles for publishing data that underpin the development of an emerging web of data. LD follows the web in providing low barriers to entry: publisher...
Norman W. Paton, Klitos Christodoulou, Alvaro A. A...