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BMCBI
2008
140views more  BMCBI 2008»
15 years 1 months ago
Improved accuracy of multiple ncRNA alignment by incorporating structural information into a MAFFT-based framework
Background: Structural alignment of RNAs is becoming important, since the discovery of functional non-coding RNAs (ncRNAs). Recent studies, mainly based on various approximations ...
Kazutaka Katoh, Hiroyuki Toh
MKM
2009
Springer
15 years 8 months ago
OpenMath in SCIEnce: SCSCP and POPCORN
In this short communication we want to give an overview of how OpenMath is used in the European project “SCIEnce” [12]. The main aim of this project is to allow unified commun...
Peter Horn, Dan Roozemond
COMPGEOM
2006
ACM
15 years 7 months ago
Algorithms for two-box covering
We study the problem of covering a set of points or polyhedra in 3 with two axis-aligned boxes in order to minimize a function of the measures of the two boxes, such as the sum or...
Esther M. Arkin, Gill Barequet, Joseph S. B. Mitch...
DAGSTUHL
2010
15 years 2 months ago
Visual Simulation of Flow
We have adopted a numerical method from computational fluid dynamics, the Lattice Boltzmann Method (LBM), for real-time simulation and visualization of flow and amorphous phenomen...
Arie E. Kaufman, Ye Zhao
BMCBI
2010
155views more  BMCBI 2010»
15 years 1 months ago
A flexible R package for nonnegative matrix factorization
Background: Nonnegative Matrix Factorization (NMF) is an unsupervised learning technique that has been applied successfully in several fields, including signal processing, face re...
Renaud Gaujoux, Cathal Seoighe