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» Coding Exon Detection Using Comparative Sequences
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EMNLP
2010
14 years 11 months ago
An Efficient Algorithm for Unsupervised Word Segmentation with Branching Entropy and MDL
This paper proposes a fast and simple unsupervised word segmentation algorithm that utilizes the local predictability of adjacent character sequences, while searching for a leaste...
Valentin Zhikov, Hiroya Takamura, Manabu Okumura
IPPS
2000
IEEE
15 years 5 months ago
Applying Interposition Techniques for Performance Analysis of OpenMP Parallel Applications
Tuning parallel applications requires the use of effective tools for detecting performance bottlenecks. Along a parallel program execution, many individual situations of performan...
Marc González, Albert Serra, Xavier Martore...
ASWEC
2009
IEEE
15 years 8 months ago
Semantic Impact and Faults in Source Code Changes: An Empirical Study
Changes to source code have become a critical factor in fault predictions. Text or syntactic approaches have been widely used. Textual analysis focuses on changed text fragments w...
Danhua Shao, Sarfraz Khurshid, Dewayne E. Perry
BMCBI
2008
108views more  BMCBI 2008»
15 years 1 months ago
An analysis of the positional distribution of DNA motifs in promoter regions and its biological relevance
Background: Motif finding algorithms have developed in their ability to use computationally efficient methods to detect patterns in biological sequences. However the posterior cla...
Ana C. Casimiro, Susana Vinga, Ana T. Freitas, Arl...
IPPS
2007
IEEE
15 years 7 months ago
High Performance Database Searching with HMMer on FPGAs
1 Profile Hidden Markov Models (profile HMMs) are used as a popular bioinformatics tool for sensitive database searching, e.g. a set of not annotated protein sequences is compared...
Timothy F. Oliver, Leow Yuan Yeow, Bertil Schmidt