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» Comparative analysis of biclustering algorithms
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ICPADS
2007
IEEE
15 years 7 months ago
Parallel Minimum Spanning Tree Heuristic for the steiner problem in graphs
Given an undirected graph with weights associated with its edges, the Steiner tree problem consists of finding a minimum weight subtree spanning a given subset of (terminal) nodes...
Hoda Akbari, Zeinab Iranmanesh, Mohammad Ghodsi
105
Voted
IDA
2005
Springer
15 years 6 months ago
Biological Cluster Validity Indices Based on the Gene Ontology
With the invention of biotechnological high throughput methods like DNA microarrays and the analysis of the resulting huge amounts of biological data, clustering algorithms gain ne...
Nora Speer, Christian Spieth, Andreas Zell
96
Voted
CPM
2007
Springer
134views Combinatorics» more  CPM 2007»
15 years 4 months ago
Efficient Computation of Substring Equivalence Classes with Suffix Arrays
This paper considers enumeration of substring equivalence classes introduced by Blumer et al. [1]. They used the equivalence classes to define an index structure called compact dir...
Kazuyuki Narisawa, Shunsuke Inenaga, Hideo Bannai,...
FCCM
2009
IEEE
106views VLSI» more  FCCM 2009»
15 years 4 months ago
Optimal Placement-aware Trace-Based Scheduling of Hardware Reconfigurations for FPGA Accelerators
Modern use of FPGAs as hardware accelerators involves the partial reconfiguration of hardware resources as the application executes. In this paper, we present a polynomial time al...
Joon Edward Sim, Weng-Fai Wong, Jürgen Teich
98
Voted
DAGSTUHL
2007
15 years 2 months ago
An Inner/Outer Stationary Iteration for Computing PageRank
We present a stationary iterative scheme for PageRank computation. The algorithm is based on a linear system formulation of the problem, uses inner/outer iterations, and amounts to...
Andrew P. Gray, Chen Greif, Tracy Lau