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ICS
2009
Tsinghua U.
15 years 4 months ago
QuakeTM: parallelizing a complex sequential application using transactional memory
“Is transactional memory useful?” is the question that cannot be answered until we provide substantial applications that can evaluate its capabilities. While existing TM appli...
Vladimir Gajinov, Ferad Zyulkyarov, Osman S. Unsal...
EMSOFT
2005
Springer
15 years 3 months ago
Optimizing inter-processor data locality on embedded chip multiprocessors
Recent research in embedded computing indicates that packing multiple processor cores on the same die is an effective way of utilizing the ever-increasing number of transistors. T...
Guilin Chen, Mahmut T. Kandemir
BMCBI
2010
148views more  BMCBI 2010»
14 years 9 months ago
Calling SNPs without a reference sequence
Background: The most common application for the next-generation sequencing technologies is resequencing, where short reads from the genome of an individual are aligned to a refere...
Aakrosh Ratan, Yu Zhang, Vanessa M. Hayes, Stephan...
BMCBI
2008
79views more  BMCBI 2008»
14 years 9 months ago
A high-throughput pipeline for designing microarray-based pathogen diagnostic assays
Background: We present a methodology for high-throughput design of oligonucleotide fingerprints for microarray-based pathogen diagnostic assays. The oligonucleotide fingerprints, ...
Ravi Vijaya Satya, Nela Zavaljevski, Kamal Kumar, ...
MICRO
2000
IEEE
176views Hardware» more  MICRO 2000»
14 years 9 months ago
An Advanced Optimizer for the IA-64 Architecture
level of abstraction, compared with the program representation for scalar optimizations. For example, loop unrolling and loop unrolland-jam transformations exploit the large regist...
Rakesh Krishnaiyer, Dattatraya Kulkarni, Daniel M....