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» Comparing sequence scaffolds
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109
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ACL
2010
15 years 1 months ago
Extracting Sequences from the Web
Classical Information Extraction (IE) systems fill slots in domain-specific frames. This paper reports on SEQ, a novel open IE system that leverages a domainindependent frame to e...
Anthony Fader, Stephen Soderland, Oren Etzioni
97
Voted
ICML
1999
IEEE
16 years 4 months ago
Detecting Motifs from Sequences
The problemofmultipleglobalcomparisonin familiesof biologicalsequences has been wellstudied. Fewer algorithms have been developed for identifying local consensus patterns or motif...
Yuh-Jyh Hu, Suzanne B. Sandmeyer, Dennis F. Kibler
117
Voted
RECOMB
1997
Springer
15 years 7 months ago
Sequence alignment with tandem duplication
Algorithm development for comparing and aligning biological sequences has, until recently, been based on the SI model of mutational events which assumes that modi cation of sequen...
Gary Benson
143
Voted
IJCAI
2007
15 years 5 months ago
Parametric Kernels for Sequence Data Analysis
A key challenge in applying kernel-based methods for discriminative learning is to identify a suitable kernel given a problem domain. Many methods instead transform the input data...
Young-In Shin, Donald S. Fussell
107
Voted
INFSOF
2006
103views more  INFSOF 2006»
15 years 3 months ago
Improving test quality using robust unique input/output circuit sequences (UIOCs)
In finite state machine (FSM) based testing, the problem of fault masking in the unique input/output (UIO) sequence may degrade the test performance of the UIO based methods. This...
Qiang Guo, Robert M. Hierons, Mark Harman, Karnig ...