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» Comparison of Clique-Listing Algorithms
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105
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BMCBI
2008
119views more  BMCBI 2008»
14 years 12 months ago
A new method for 2D gel spot alignment: application to the analysis of large sample sets in clinical proteomics
Background: In current comparative proteomics studies, the large number of images generated by 2D gels is currently compared using spot matching algorithms. Unfortunately, differe...
Sabine Pérès, Laurence Molina, Nicol...
FUIN
2008
99views more  FUIN 2008»
14 years 11 months ago
Universality Analysis for One-Clock Timed Automata
This paper is concerned with the universality problem for timed automata: given a timed automaton A, does A accept all timed words? Alur and Dill have shown that the universality p...
Parosh Aziz Abdulla, Johann Deneux, Joël Ouak...
BMCBI
2006
181views more  BMCBI 2006»
14 years 11 months ago
Automatic pathway building in biological association networks
Background: Scientific literature is a source of the most reliable and comprehensive knowledge about molecular interaction networks. Formalization of this knowledge is necessary f...
Anton Yuryev, Zufar Mulyukov, Ekaterina Kotelnikov...
74
Voted
BMCBI
2006
125views more  BMCBI 2006»
14 years 11 months ago
Automated functional classification of experimental and predicted protein structures
Background: Proteins that are similar in sequence or structure may perform different functions in nature. In such cases, function cannot be inferred from sequence or structural si...
Kai Wang, Ram Samudrala
91
Voted
BMCBI
2006
118views more  BMCBI 2006»
14 years 11 months ago
Statistical analysis of an RNA titration series evaluates microarray precision and sensitivity on a whole-array basis
Background: Concerns are often raised about the accuracy of microarray technologies and the degree of cross-platform agreement, but there are yet no methods which can unambiguousl...
Andrew J. Holloway, Alicia Oshlack, Dileepa S. Diy...