We present an optimized parallelization scheme for molecular dynamics simulations of large biomolecular systems, implemented in the production-quality molecular dynamics program N...
Robert Brunner, James C. Phillips, Laxmikant V. Ka...
SIFFEA is an automated system for parallel nite element method (PFEM) with unstructured meshes on distributed memory machines. It synthesizes mesh generator, mesh partitioner, line...
: Large scientific applications which rely on highly parallel computational analysis require highly parallel data access. We describe an object-oriented, scientific database system...
John L. Pfaltz, Russell F. Haddleton, James C. Fre...
Synchronization primitives for large shared-memory multiprocessors need to minimize latency and contention. Software queue-based locks address these goals, but suffer if a process...
Robert W. Wisniewski, Leonidas I. Kontothanassis, ...
Nearly all programmable commercial hardware solutions offered for high-speed networking systems are capable of meeting the performance and flexibility requirements of equipment ve...