Sciweavers

1855 search results - page 291 / 371
» Composing model programs for analysis
Sort
View
CSB
2005
IEEE
118views Bioinformatics» more  CSB 2005»
15 years 3 months ago
Gene Teams with Relaxed Proximity Constraint
Functionally related genes co-evolve, probably due to the strong selection pressure in evolution. Thus we expect that they are present in multiple genomes. Physical proximity amon...
Sun Kim, Jeong-Hyeon Choi, Jiong Yang
CAV
2006
Springer
95views Hardware» more  CAV 2006»
15 years 1 months ago
Yasm: A Software Model-Checker for Verification and Refutation
Example Guided Abstraction Refinement (CEGAR) [6] framework. A number of wellengineered software model-checkers are available, e.g., SLAM [1] and BLAST [12]. Why build another one?...
Arie Gurfinkel, Ou Wei, Marsha Chechik
ALMOB
2006
155views more  ALMOB 2006»
14 years 10 months ago
A phylogenetic generalized hidden Markov model for predicting alternatively spliced exons
Background: An important challenge in eukaryotic gene prediction is accurate identification of alternatively spliced exons. Functional transcripts can go undetected in gene expres...
Jonathan E. Allen, Steven L. Salzberg
ICSE
2001
IEEE-ACM
15 years 2 months ago
Using Transformation Systems for Software Maintenance and Reengineering
Software maintenance costs dominate software engineering costs, partly because most such engineering is done manually. Program Transformation tools leverage an engineer-provided b...
Ira D. Baxter
BMCBI
2006
155views more  BMCBI 2006»
14 years 10 months ago
CAVER: a new tool to explore routes from protein clefts, pockets and cavities
Background: The main aim of this study was to develop and implement an algorithm for the rapid, accurate and automated identification of paths leading from buried protein clefts, ...
Martin Petrek, Michal Otyepka, Pavel Banás,...