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WASA
2009
Springer
189views Algorithms» more  WASA 2009»
15 years 4 months ago
Information Extraction as Link Prediction: Using Curated Citation Networks to Improve Gene Detection
Abstract. In this paper we explore the usefulness of various types of publicationrelated metadata, such as citation networks and curated databases, for the task of identifying gene...
Andrew Arnold, William W. Cohen
BMCBI
2006
169views more  BMCBI 2006»
14 years 10 months ago
Finding biological process modifications in cancer tissues by mining gene expression correlations
Background: Through the use of DNA microarrays it is now possible to obtain quantitative measurements of the expression of thousands of genes from a biological sample. This techno...
Giacomo Gamberoni, Sergio Storari, Stefano Volinia
ICMLA
2010
14 years 8 months ago
Smoothing Gene Expression Using Biological Networks
Gene expression (microarray) data have been used widely in bioinformatics. The expression data of a large number of genes from small numbers of subjects are used to identify inform...
Yue Fan, Mark A. Kon, Shinuk Kim, Charles DeLisi
BMCBI
2006
156views more  BMCBI 2006»
14 years 10 months ago
GOFFA: Gene Ontology For Functional Analysis - A FDA Gene Ontology Tool for Analysis of Genomic and Proteomic Data
Background: Gene Ontology (GO) characterizes and categorizes the functions of genes and their products according to biological processes, molecular functions and cellular componen...
Hongmei Sun, Hong Fang, Tao Chen, Roger Perkins, W...
EUROGP
2010
Springer
217views Optimization» more  EUROGP 2010»
15 years 4 months ago
Evolving Genes to Balance a Pole
We discuss how to use a Genetic Regulatory Network as an evolutionary representation to solve a typical GP reinforcement problem, the pole balancing. The network is a modified ver...
Miguel Nicolau, Marc Schoenauer, Wolfgang Banzhaf