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» Computation of Median Gene Clusters
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CMSB
2006
Springer
15 years 1 months ago
Possibilistic Approach to Biclustering: An Application to Oligonucleotide Microarray Data Analysis
Abstract. The important research objective of identifying genes with similar behavior with respect to different conditions has recently been tackled with biclustering techniques. I...
Maurizio Filippone, Francesco Masulli, Stefano Rov...
ICDCSW
2007
IEEE
15 years 4 months ago
Using stream queries to measure communication performance of a parallel computing environment
We have developed a data stream management system that supports declarative stream queries running over high data volumes in a supercomputing environment. To enable specification ...
Erik Zeitler, Tore Risch
CLUSTER
2008
IEEE
15 years 4 months ago
A trace-driven emulation framework to predict scalability of large clusters in presence of OS Jitter
—Various studies have pointed out the debilitating effects of OS Jitter on the performance of parallel applications on large clusters such as the ASCI Purple and the Mare Nostrum...
Pradipta De, Ravi Kothari, Vijay Mann
RECOMB
2002
Springer
15 years 10 months ago
A new approach to analyzing gene expression time series data
We present algorithms for time-series gene expression analysis that permit the principled estimation of unobserved timepoints, clustering, and dataset alignment. Each expression p...
Ziv Bar-Joseph, Georg Gerber, David K. Gifford, To...
BMCBI
2007
265views more  BMCBI 2007»
14 years 9 months ago
Large scale clustering of protein sequences with FORCE -A layout based heuristic for weighted cluster editing
Background: Detecting groups of functionally related proteins from their amino acid sequence alone has been a long-standing challenge in computational genome research. Several clu...
Tobias Wittkop, Jan Baumbach, Francisco P. Lobo, S...