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IDA
2003
Springer
15 years 3 months ago
Similarity-Based Neural Networks for Applications in Computational Molecular Biology
This paper presents an alternative to distance-based neural networks. A distance measure is the underlying property on which many neural models rely, for example self-organizing ma...
Igor Fischer
IPPS
1999
IEEE
15 years 2 months ago
Parallel Biological Sequence Comparison Using Prefix Computations
We present practical parallel algorithms using prefix computations for various problems that arise in pairwise comparison of biological sequences. We consider both constant and af...
Srinivas Aluru, Natsuhiko Futamura, Kishan Mehrotr...
WSC
2007
15 years 6 days ago
Combining micro and macro-modeling in DEVS for computational biology
In computational biology there is an increasing need to combine micro and macro views of the system of interest. Therefore, explicit means to describe micro and macro level and th...
Adelinde M. Uhrmacher, Roland Ewald, Mathias John,...
ALMOB
2006
110views more  ALMOB 2006»
14 years 10 months ago
Computing distribution of scale independent motifs in biological sequences
The use of Chaos Game Representation (CGR) or its generalization, Universal Sequence Maps (USM), to describe the distribution of biological sequences has been found objectionable ...
Jonas S. Almeida, Susana Vinga
COMPUTER
2004
65views more  COMPUTER 2004»
14 years 9 months ago
Computational Challenges of Systems Biology
Anthony Finkelstein, James Hetherington, Linzhong ...