Sciweavers

82 search results - page 4 / 17
» Computational Nature of Processes Induced by Biochemical Rea...
Sort
View
ICCAD
2010
IEEE
117views Hardware» more  ICCAD 2010»
14 years 9 months ago
A synthesis flow for digital signal processing with biomolecular reactions
Abstract--We present a methodology for implementing digital signal processing (DSP) operations such as filtering with biomolecular reactions. From a DSP specification, we demonstra...
Hua Jiang, Aleksandra P. Kharam, Marc D. Riedel, K...
67
Voted
ICASSP
2011
IEEE
14 years 3 months ago
Message-passing for base-calling in sequencing-by-synthesis systems
Performance of DNA sequencing-by-synthesis systems is fundamentally limited by the stochastic nature of the underlying biochemical process. We develop a novel graphical representa...
Sang Hyun Lee, Manohar Shamaiah, Haris Vikalo
BIRD
2008
Springer
158views Bioinformatics» more  BIRD 2008»
15 years 1 months ago
A Computational Method for Reconstructing Gapless Metabolic Networks
Abstract. We propose a computational method for reconstructing metabolic networks. The method utilizes optimization techniques and graph traversal algorithms to discover a set of b...
Esa Pitkänen, Ari Rantanen, Juho Rousu, Esko ...
BMCBI
2011
14 years 6 months ago
Hierarchical graphs for rule-based modeling of biochemical systems
Background: In rule-based modeling, graphs are used to represent molecules: a colored vertex represents a component of a molecule, a vertex attribute represents the internal state...
Nathan W. Lemons, Bin Hu, William S. Hlavacek
ESANN
2004
15 years 1 months ago
Computational model of amygdala network supported by neurobiological data
Abstract. The amygdala has repeatedly been involved in the processing of emotional reactions and conditioning. This paper presents a neurobiologically inspired computational model ...
Mélanie Falgairolle, Agnès Gorge, Je...