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2005
ACM
16 years 24 days ago
ClawHMMER: A Streaming HMMer-Search Implementation
The proliferation of biological sequence data has motivated the need for an extremely fast probabilistic sequence search. One method for performing this search involves evaluating...
Daniel Reiter Horn, Mike Houston, Pat Hanrahan
206
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IWVF
2001
Springer
15 years 11 months ago
The Shock Scaffold for Representing 3D Shape
The usefulness of the 3D Medial Axis (MA) is dependent on both the availability of accurate and stable methods for computing individual MA points and on schemes for deriving the l...
Frederic F. Leymarie, Benjamin B. Kimia
SGP
2007
15 years 9 months ago
Triangulations with locally optimal Steiner points
We present two new Delaunay refinement algorithms, second an extension of the first. For a given input domain (a set of points or a planar straight line graph), and a threshold an...
Hale Erten, Alper Üngör
ICASSP
2011
IEEE
14 years 11 months ago
Message-passing for base-calling in sequencing-by-synthesis systems
Performance of DNA sequencing-by-synthesis systems is fundamentally limited by the stochastic nature of the underlying biochemical process. We develop a novel graphical representa...
Sang Hyun Lee, Manohar Shamaiah, Haris Vikalo
IEEECGIV
2009
IEEE
16 years 1 months ago
Monomial Forms for Curves in CAGD with their Applications
—There are several methods used for plotting curves in CAGD, e.g., by directly computing their basis functions (polynomials) or using their recursive algorithms. For the former m...
Chanon Aphirukmatakun, Natasha Dejdumrong