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BMCBI
2008
121views more  BMCBI 2008»
14 years 11 months ago
OntoDas - a tool for facilitating the construction of complex queries to the Gene Ontology
Background: Ontologies such as the Gene Ontology can enable the construction of complex queries over biological information in a conceptual way, however existing systems to do thi...
Kieran O'Neill, Alexander García Castro, An...
84
Voted
IPPS
2007
IEEE
15 years 5 months ago
Modeling of NAMD's Network Input/Output on Large PC Clusters
This study examined the interplay among processor speed, cluster interconnect and file I/O, using parallel applications to quantify interactions. We focused on a common case wher...
Nancy Tran, Daniel A. Reed
EDBT
2004
ACM
142views Database» more  EDBT 2004»
15 years 11 months ago
Iterative Incremental Clustering of Time Series
We present a novel anytime version of partitional clustering algorithm, such as k-Means and EM, for time series. The algorithm works by leveraging off the multi-resolution property...
Jessica Lin, Michail Vlachos, Eamonn J. Keogh, Dim...
IWCC
1999
IEEE
15 years 3 months ago
Design and Analysis of the Alliance/University of New Mexico Roadrunner Linux SMP SuperCluster
This paper will discuss high performance clustering from a series of critical topics: architectural design, system software infrastructure, and programming environment. This will ...
David A. Bader, Arthur B. Maccabe, Jason R. Mastal...
IPPS
2005
IEEE
15 years 4 months ago
Message Passing for Linux Clusters with Gigabit Ethernet Mesh Connections
Multiple copper-based commodity Gigabit Ethernet (GigE) interconnects (adapters) on a single host can lead to Linux clusters with mesh/torus connections without using expensive sw...
Jie Chen, William A. Watson III, Robert Edwards, W...