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BMCBI
2006
169views more  BMCBI 2006»
15 years 5 months ago
Finding biological process modifications in cancer tissues by mining gene expression correlations
Background: Through the use of DNA microarrays it is now possible to obtain quantitative measurements of the expression of thousands of genes from a biological sample. This techno...
Giacomo Gamberoni, Sergio Storari, Stefano Volinia
SODA
2010
ACM
189views Algorithms» more  SODA 2010»
16 years 2 months ago
Correlation Clustering with Noisy Input
Correlation clustering is a type of clustering that uses a basic form of input data: For every pair of data items, the input specifies whether they are similar (belonging to the s...
Claire Mathieu, Warren Schudy
WILF
2007
Springer
170views Fuzzy Logic» more  WILF 2007»
15 years 11 months ago
Time-Series Alignment by Non-negative Multiple Generalized Canonical Correlation Analysis
Background: Quantitative analysis of differential protein expressions requires to align temporal elution measurements from liquid chromatography coupled to mass spectrometry (LC/M...
Bernd Fischer, Volker Roth, Joachim M. Buhmann
BMCBI
2010
193views more  BMCBI 2010»
15 years 5 months ago
Probe set filtering increases correlation between Affymetrix GeneChip and qRT-PCR expression measurements
Background: Affymetrix GeneChip microarrays are popular platforms for expression profiling in two types of studies: detection of differential expression computed by p-values of t-...
Jakub Mieczkowski, Magdalena E. Tyburczy, Michal D...
MLG
2007
Springer
15 years 11 months ago
Inferring Vertex Properties from Topology in Large Networks
: Network topology not only tells about tightly-connected “communities,” but also gives cues on more subtle properties of the vertices. We introduce a simple probabilistic late...
Janne Sinkkonen, Janne Aukia, Samuel Kaski