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BMCBI
2004
102views more  BMCBI 2004»
14 years 10 months ago
FRAGS: estimation of coding sequence substitution rates from fragmentary data
Background: Rates of substitution in protein-coding sequences can provide important insights into evolutionary processes that are of biomedical and theoretical interest. Increased...
Estienne C. Swart, Winston A. Hide, Cathal Seoighe
CASCON
1996
139views Education» more  CASCON 1996»
14 years 11 months ago
Data locality sensitivity of multithreaded computations on a distributed-memory multiprocessor
The locality of the data in parallel programs is known to have a strong impact on the performance of distributed-memory multiprocessor systems. The worse the locality in access pa...
Xinmin Tian, Shashank S. Nemawarkar, Guang R. Gao,...
RTAS
2006
IEEE
15 years 4 months ago
Bounding Preemption Delay within Data Cache Reference Patterns for Real-Time Tasks
Caches have become invaluable for higher-end architectures to hide, in part, the increasing gap between processor speed and memory access times. While the effect of caches on timi...
Harini Ramaprasad, Frank Mueller
SC
1995
ACM
15 years 1 months ago
Communication Optimizations for Parallel Computing Using Data Access Information
Given the large communication overheads characteristic of modern parallel machines, optimizations that eliminate, hide or parallelize communication may improve the performance of ...
Martin C. Rinard
BMCBI
2007
156views more  BMCBI 2007»
14 years 10 months ago
Large-scale clustering of CAGE tag expression data
Background: Recent analyses have suggested that many genes possess multiple transcription start sites (TSSs) that are differentially utilized in different tissues and cell lines. ...
Kazuro Shimokawa, Yuko Okamura-Oho, Takio Kurita, ...