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SIGMOD
2007
ACM
169views Database» more  SIGMOD 2007»
15 years 9 months ago
Genome-scale disk-based suffix tree indexing
With the exponential growth of biological sequence databases, it has become critical to develop effective techniques for storing, querying, and analyzing these massive data. Suffi...
Benjarath Phoophakdee, Mohammed J. Zaki
BMCBI
2007
153views more  BMCBI 2007»
14 years 9 months ago
MPHASYS: a mouse phenotype analysis system
Background: Systematic, high-throughput studies of mouse phenotypes have been hampered by the inability to analyze individual animal data from a multitude of sources in an integra...
R. Brent Calder, Rudolf B. Beems, Harry van Steeg,...
CORR
2012
Springer
167views Education» more  CORR 2012»
13 years 5 months ago
Multidimensional counting grids: Inferring word order from disordered bags of words
Models of bags of words typically assume topic mixing so that the words in a single bag come from a limited number of topics. We show here that many sets of bag of words exhibit a...
Nebojsa Jojic, Alessandro Perina
IPPS
2007
IEEE
15 years 3 months ago
Scheduling Issues in Optimistic Parallelization
Irregular applications, which rely on pointer-based data structures, are often difficult to parallelize. The inputdependent nature of their execution means that traditional paral...
Milind Kulkarni, Keshav Pingali
IPPS
2005
IEEE
15 years 3 months ago
Maximizing the Lifetime of Dominating Sets
We investigate the problem of maximizing the lifetime of wireless ad hoc and sensor networks. Being battery powered, nodes in such networks have to perform their intended task und...
Thomas Moscibroda, Roger Wattenhofer