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103
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BMCBI
2008
204views more  BMCBI 2008»
14 years 10 months ago
EST2uni: an open, parallel tool for automated EST analysis and database creation, with a data mining web interface and microarra
Background: Expressed sequence tag (EST) collections are composed of a high number of single-pass, redundant, partial sequences, which need to be processed, clustered, and annotat...
Javier Forment, Francisco Gilabert Villamón...
SOCO
2008
Springer
14 years 10 months ago
GP on SPMD parallel graphics hardware for mega Bioinformatics data mining
Abstract We demonstrate a SIMD C++ genetic programming system on a single 128 node parallel nVidia GeForce 8800 GTX GPU under RapidMind's GPGPU Linux software by predicting te...
William B. Langdon, Andrew P. Harrison
93
Voted
HPCN
1995
Springer
15 years 1 months ago
A model-driven tool for performance measurement and analysis of parallel programs
The performance of parallel computing systems is strongly dependent on the runtime behaviour of parallel programs. This paper describes a new approach to measure and analyze the ru...
Xiandeng Huang, Christoph Steigner
103
Voted
MICRO
2007
IEEE
164views Hardware» more  MICRO 2007»
15 years 4 months ago
A Practical Approach to Exploiting Coarse-Grained Pipeline Parallelism in C Programs
The emergence of multicore processors has heightened the need for effective parallel programming practices. In addition to writing new parallel programs, the next generation of pr...
William Thies, Vikram Chandrasekhar, Saman P. Amar...
JAVA
2000
Springer
15 years 1 months ago
A Java fork/join framework
This paper describes the design, implementation, and performance of a Java framework for supporting a style of parallel programming in which problems are solved by (recursively) s...
Doug Lea