Background: Expressed sequence tag (EST) collections are composed of a high number of single-pass, redundant, partial sequences, which need to be processed, clustered, and annotat...
Abstract We demonstrate a SIMD C++ genetic programming system on a single 128 node parallel nVidia GeForce 8800 GTX GPU under RapidMind's GPGPU Linux software by predicting te...
The performance of parallel computing systems is strongly dependent on the runtime behaviour of parallel programs. This paper describes a new approach to measure and analyze the ru...
The emergence of multicore processors has heightened the need for effective parallel programming practices. In addition to writing new parallel programs, the next generation of pr...
William Thies, Vikram Chandrasekhar, Saman P. Amar...
This paper describes the design, implementation, and performance of a Java framework for supporting a style of parallel programming in which problems are solved by (recursively) s...