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BMCBI
2010
139views more  BMCBI 2010»
14 years 10 months ago
RNAstructure: software for RNA secondary structure prediction and analysis
Background: To understand an RNA sequence's mechanism of action, the structure must be known. Furthermore, target RNA structure is an important consideration in the design of...
Jessica S. Reuter, David H. Mathews
BMCBI
2010
152views more  BMCBI 2010»
14 years 10 months ago
FITBAR: a web tool for the robust prediction of prokaryotic regulons
Background: The binding of regulatory proteins to their specific DNA targets determines the accurate expression of the neighboring genes. The in silico prediction of new binding s...
Jacques Oberto
BMCBI
2010
122views more  BMCBI 2010»
14 years 10 months ago
Simultaneous prediction of transcription factor binding sites in a group of prokaryotic genomes
Background: Our current understanding of transcription factor binding sites (TFBSs) in sequenced prokaryotic genomes is very limited due to the lack of an accurate and efficient c...
Shaoqiang Zhang, Shan Li, Phuc T. Pham, Zhengchang...
SOCO
2010
Springer
14 years 4 months ago
Taximeter verification with GPS and soft computing techniques
Until recently, local governments in Spain were using machines with rolling cylinders for verifying taximeters. However, the condition of the tires can lead to errors in the proces...
José Villar, Adolfo Otero, José Oter...
PLDI
2011
ACM
14 years 24 days ago
Systematic editing: generating program transformations from an example
Software modifications are often systematic—they consist of similar, but not identical, program changes to multiple contexts. Existing tools for systematic program transformati...
Na Meng, Miryung Kim, Kathryn S. McKinley