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» Detecting microRNA activity from gene expression data
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BMCBI
2011
14 years 7 months ago
The PathOlogist: An Automated Tool for Pathway-Centric Analysis
Background: The PathOlogist is a new tool designed to transform large sets of gene expression data into quantitative descriptors of pathway-level behavior. The tool aims to provid...
Sharon I. Greenblum, Sol Efroni, Carl F. Schaefer,...
BMCBI
2008
126views more  BMCBI 2008»
15 years 16 days ago
NITPICK: peak identification for mass spectrometry data
Background: The reliable extraction of features from mass spectra is a fundamental step in the automated analysis of proteomic mass spectrometry (MS) experiments. Results: This co...
Bernhard Y. Renard, Marc Kirchner, Hanno Steen, Ju...
NAR
2011
267views Computer Vision» more  NAR 2011»
14 years 7 months ago
EcoCyc: a comprehensive database of Escherichia coli biology
EcoCyc (http://EcoCyc.org) is a comprehensive model organism database for Escherichia coli K-12 MG1655. From the scientific literature, EcoCyc captures the functions of individual...
Ingrid M. Keseler, Julio Collado-Vides, Alberto Sa...
BMCBI
2005
106views more  BMCBI 2005»
15 years 10 days ago
ESTree db: a Tool for Peach Functional Genomics
Background: The ESTree db http://www.itb.cnr.it/estree/ represents a collection of Prunus persica expressed sequenced tags (ESTs) and is intended as a resource for peach functiona...
Barbara Lazzari, Andrea Caprera, Alberto Vecchiett...
CCIA
2007
Springer
15 years 6 months ago
Mendelian error detection in complex pedigrees using weighted constraint satisfaction techniques
With the arrival of high throughput genotyping techniques, the detection of likely genotyping errors is becoming an increasingly important problem. In this paper we are interested...
Martí Sánchez, Simon de Givry, Thoma...