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KI
2004
Springer
13 years 11 months ago
Mining Hierarchical Temporal Patterns in Multivariate Time Series
Abstract. The Unification-based Temporal Grammar is a temporal extension of static unification-based grammars. It defines a hierarchical temporal rule language to express comple...
Fabian Mörchen, Alfred Ultsch
BMCBI
2005
178views more  BMCBI 2005»
13 years 6 months ago
A quantization method based on threshold optimization for microarray short time series
Background: Reconstructing regulatory networks from gene expression profiles is a challenging problem of functional genomics. In microarray studies the number of samples is often ...
Barbara Di Camillo, Fatima Sanchez-Cabo, Gianna To...
CLEIEJ
2007
152views more  CLEIEJ 2007»
13 years 6 months ago
Gene Expression Analysis using Markov Chains extracted from RNNs
Abstract. This paper present a new approach for the analysis of gene expression, by extracting a Markov Chain from trained Recurrent Neural Networks (RNNs). A lot of microarray dat...
Igor Lorenzato Almeida, Denise Regina Pechmann Sim...
ACSC
2009
IEEE
14 years 1 months ago
Inference of Gene Expression Networks Using Memetic Gene Expression Programming
In this paper we aim to infer a model of genetic networks from time series data of gene expression profiles by using a new gene expression programming algorithm. Gene expression n...
Armita Zarnegar, Peter Vamplew, Andrew Stranieri
BIOINFORMATICS
2005
151views more  BIOINFORMATICS 2005»
13 years 6 months ago
Differential and trajectory methods for time course gene expression data
Motivation: The issue of high dimensionality in microarray data has been, and remains, a hot topic in statistical and computational analysis. Efficient gene filtering and differen...
Yulan Liang, Bamidele Tayo, Xueya Cai, Arpad Kelem...