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SCFBM
2008
92views more  SCFBM 2008»
15 years 5 months ago
CRANKITE: A fast polypeptide backbone conformation sampler
Background: CRANKITE is a suite of programs for simulating backbone conformations of polypeptides and proteins. The core of the suite is an efficient Metropolis Monte Carlo sample...
Alexei A. Podtelezhnikov, David L. Wild
RECOMB
2010
Springer
15 years 4 months ago
Predicting Nucleosome Positioning Using Multiple Evidence Tracks
Abstract. We describe a probabilistic model, implemented as a dynamic Bayesian network, that can be used to predict nucleosome positioning along a chromosome based on one or more g...
Sheila M. Reynolds, Zhiping Weng, Jeff A. Bilmes, ...
IEEEPACT
2009
IEEE
15 years 3 months ago
Adaptive Locks: Combining Transactions and Locks for Efficient Concurrency
Transactional memory is being advanced as an alternative to traditional lock-based synchronization for concurrent programming. Transactional memory simplifies the programming mode...
Takayuki Usui, Reimer Behrends, Jacob Evans, Yanni...
POPL
2012
ACM
14 years 1 months ago
A language for automatically enforcing privacy policies
It is becoming increasingly important for applications to protect sensitive data. With current techniques, the programmer bears the burden of ensuring that the application’s beh...
Jean Yang, Kuat Yessenov, Armando Solar-Lezama
VIS
2006
IEEE
157views Visualization» more  VIS 2006»
16 years 7 months ago
Analyzing Complex FTMS Simulations: a Case Study in High-Level Visualization of Ion Motions
Current practice in particle visualization renders particle position data directly onto the screen as points or glyphs. Using a camera placed at a fixed position, particle motions...
Wojciech Burakiewicz, Robert van Liere
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