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» Efficient Seeding Techniques for Protein Similarity Search
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ICPPW
2009
IEEE
14 years 7 months ago
A Scalable Parallel Approach for Peptide Identification from Large-Scale Mass Spectrometry Data
Identifying peptides, which are short polymeric chains of amino acid residues in a protein sequence, is of fundamental importance in systems biology research. The most popular appr...
Gaurav Ramesh Kulkarni, Ananth Kalyanaraman, Willi...
BMCBI
2007
166views more  BMCBI 2007»
14 years 9 months ago
How to decide which are the most pertinent overly-represented features during gene set enrichment analysis
Background: The search for enriched features has become widely used to characterize a set of genes or proteins. A key aspect of this technique is its ability to identify correlati...
Roland Barriot, David J. Sherman, Isabelle Dutour
BMCBI
2006
116views more  BMCBI 2006»
14 years 9 months ago
HotSwap for bioinformatics: A STRAP tutorial
Background: Bioinformatics applications are now routinely used to analyze large amounts of data. Application development often requires many cycles of optimization, compiling, and...
Christoph Gille, Peter N. Robinson
WOWMOM
2006
ACM
108views Multimedia» more  WOWMOM 2006»
15 years 3 months ago
Multimedia Correlation Analysis in Unstructured Peer-to-Peer Networks
Recent years saw the rapid development of peer-topeer (P2P) networks in a great variety of applications. However, similarity-based k-nearest-neighbor retrieval (k-NN) is still a c...
Bo Yang, Ali R. Hurson, Yu Jiao, Thomas E. Potok
TASLP
2008
75views more  TASLP 2008»
14 years 9 months ago
Efficient Index-Based Audio Matching
Given a large audio database of music recordings, the goal of classical audio identification is to identify a particular audio recording by means of a short audio fragment. Even th...
Frank Kurth, Meinard Müller