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BMCBI
2006
81views more  BMCBI 2006»
14 years 9 months ago
Multipolar representation of protein structure
Background: That the structure determines the function of proteins is a central paradigm in biology. However, protein functions are more directly related to cooperative effects at...
Apostol Gramada, Philip E. Bourne
PPDP
2009
Springer
15 years 4 months ago
Reasoning with hypothetical judgments and open terms in hybrid
Hybrid is a system developed to specify and reason about logics, programming languages, and other formal systems expressed in rder abstract syntax (HOAS). An important goal of Hyb...
Amy P. Felty, Alberto Momigliano
98
Voted
ICDE
2002
IEEE
181views Database» more  ICDE 2002»
15 years 2 months ago
YFilter: Efficient and Scalable Filtering of XML Documents
Soon, much of the data exchanged over the Internet will be encoded in XML, allowing for sophisticated filtering and content-based routing. We have built a filtering engine called ...
Yanlei Diao, Peter M. Fischer, Michael J. Franklin...
BMCBI
2010
122views more  BMCBI 2010»
14 years 9 months ago
Simultaneous prediction of transcription factor binding sites in a group of prokaryotic genomes
Background: Our current understanding of transcription factor binding sites (TFBSs) in sequenced prokaryotic genomes is very limited due to the lack of an accurate and efficient c...
Shaoqiang Zhang, Shan Li, Phuc T. Pham, Zhengchang...
BMCBI
2004
91views more  BMCBI 2004»
14 years 9 months ago
SIGI: score-based identification of genomic islands
Background: Genomic islands can be observed in many microbial genomes. These stretches of DNA have a conspicuous composition with regard to sequence or encoded functions. Genomic ...
Rainer Merkl