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ACAL
2007
Springer
15 years 10 months ago
An Integrated QAP-Based Approach to Visualize Patterns of Gene Expression Similarity
Abstract. This paper illustrates how the Quadratic Assignment Problem (QAP) is used as a mathematical model that helps to produce a visualization of microarray data, based on the r...
Mario Inostroza-Ponta, Alexandre Mendes, Regina Be...
BMCBI
2008
145views more  BMCBI 2008»
15 years 4 months ago
Directed acyclic graph kernels for structural RNA analysis
Background: Recent discoveries of a large variety of important roles for non-coding RNAs (ncRNAs) have been reported by numerous researchers. In order to analyze ncRNAs by kernel ...
Kengo Sato, Toutai Mituyama, Kiyoshi Asai, Yasubum...
ISMB
1994
15 years 5 months ago
An Improved System for Exon Recognition and Gene Modeling in Human DNA Sequence
A new version of the GRAIL system (Uberbacher and Mural, 1991; Mural et al., 1992; Uberbacher et al., 1993), called GRAILII, has recently been developed (Xu et al., 1994). GRAILII...
Yin Xu, J. Ralph Einstein, Richard J. Mural, Manes...
SPIRE
2005
Springer
15 years 10 months ago
Using the k-Nearest Neighbor Graph for Proximity Searching in Metric Spaces
Proximity searching consists in retrieving from a database, objects that are close to a query. For this type of searching problem, the most general model is the metric space, where...
Rodrigo Paredes, Edgar Chávez
CVPR
2009
IEEE
16 years 2 months ago
Markov Chain Monte Carlo Combined with Deterministic Methods for Markov Random Field Optimization
Many vision problems have been formulated as en- ergy minimization problems and there have been signif- icant advances in energy minimization algorithms. The most widely-used energ...
Wonsik Kim (Seoul National University), Kyoung Mu ...