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» Evaluating Parallel Computing Systems in Bioinformatics
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SC
1995
ACM
15 years 1 months ago
Performance of a Parallel Global Atmospheric Chemical Tracer Model
As part of a NASA HPCC Grand Challenge project, we are designing and implementing a parallel atmospheric chemical tracer model that will be suitable for use in global simulations....
James Demmel, Sharon Smith
ICDCSW
2006
IEEE
15 years 3 months ago
Evaluation of Unstructured Overlay Maintenance Protocols under Churn
An overlay network is formed on top of – and generally independently from – the underlying physical computer network, by the peers (nodes) of a P2P system. The dynamics of pee...
Roberto Baldoni, Silvia Bonomi, Adriano Rippa, Leo...
FPL
2010
Springer
170views Hardware» more  FPL 2010»
14 years 7 months ago
IP Based Configurable SIMD Massively Parallel SoC
Significant advances in the field of configurable computing have enabled parallel processing within a single FieldProgrammable Gate Array (FPGA) chip. This paper presents the imple...
Mouna Baklouti, Mohamed Abid, Philippe Marquet, Je...
IPPS
2007
IEEE
15 years 4 months ago
Building the Tree of Life on Terascale Systems
Bayesian phylogenetic inference is an important alternative to maximum likelihood-based phylogenetic method. However, inferring large trees using the Bayesian approach is computat...
Xizhou Feng, Kirk W. Cameron, Carlos P. Sosa, Bria...
ICDM
2006
IEEE
147views Data Mining» more  ICDM 2006»
15 years 3 months ago
Adaptive Parallel Graph Mining for CMP Architectures
Mining graph data is an increasingly popular challenge, which has practical applications in many areas, including molecular substructure discovery, web link analysis, fraud detect...
Gregory Buehrer, Srinivasan Parthasarathy, Yen-Kua...