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» Evolutionary Computation in Structural Design
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RECOMB
2003
Springer
16 years 5 months ago
Combining phylogenetic and hidden Markov models in biosequence analysis
A few models have appeared in recent years that consider not only the way substitutions occur through evolutionary history at each site of a genome, but also the way the process c...
Adam C. Siepel, David Haussler
CIBCB
2007
IEEE
15 years 11 months ago
Evolving Extremal Epidemic Networks
The susceptible, infected, removed model for epidemics assumes that the population in which the epidemic takes place is well mixed. This strong assumption can be relaxed by permit...
Dan Ashlock, Fatemeh Jafargholi
ICCS
2007
Springer
15 years 10 months ago
Searching and Updating Metric Space Databases Using the Parallel EGNAT
Abstract. The Evolutionary Geometric Near-neighbor Access Tree (EGNAT) is a recently proposed data structure that is suitable for indexing large collections of complex objects. It ...
Mauricio Marín, Roberto Uribe, Ricardo J. B...
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ISMB
2003
15 years 6 months ago
Deriving phylogenetic trees from the similarity analysis of metabolic pathways
Comparative analysis of metabolic pathways in different genomes can give insights into the understanding of evolutionary and organizational relationships among species. This type ...
Maureen Heymans, Ambuj K. Singh
ISMB
2000
15 years 6 months ago
Prediction of the Number of Residue Contacts in Proteins
Knowing the number of residue contacts in a protein is crucial for deriving constraints useful in modeling protein folding, protein structure, and/or scoring remote homology searc...
Piero Fariselli, Rita Casadio