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BMCBI
2005
87views more  BMCBI 2005»
14 years 9 months ago
ProfNet, a method to derive profile-profile alignment scoring functions that improves the alignments of distantly related protei
Background: Profile-profile methods have been used for some years now to detect and align homologous proteins. The best such methods use information from the background distributi...
Tomas Ohlson, Arne Elofsson
TEC
2002
161views more  TEC 2002»
14 years 9 months ago
A fast and elitist multiobjective genetic algorithm: NSGA-II
Multiobjective evolutionary algorithms (EAs) that use nondominated sorting and sharing have been criticized mainly for their: 1) ( 3) computational complexity (where is the number ...
Kalyanmoy Deb, Samir Agrawal, Amrit Pratap, T. Mey...
ISBRA
2009
Springer
15 years 4 months ago
Untangling Tanglegrams: Comparing Trees by Their Drawings
A tanglegram is a pair of trees on the same set of leaves with matching leaves in the two trees joined by an edge. Tanglegrams are widely used in biology – to compare evolutiona...
Balaji Venkatachalam, Jim Apple, Katherine St. Joh...
GECCO
2007
Springer
179views Optimization» more  GECCO 2007»
15 years 3 months ago
The second harmonic generation case-study as a gateway for es to quantum control problems
The Second Harmonic Generation (SHG), a process that turns out to be a good test case in the physics lab, can also be considered as a fairly simple theoretical test function for g...
Ofer M. Shir, Thomas Bäck
74
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GECCO
2007
Springer
183views Optimization» more  GECCO 2007»
15 years 3 months ago
Screening the parameters affecting heuristic performance
This research screens the tuning parameters of a combinatorial optimization heuristic. Specifically, it presents a Design of Experiments (DOE) approach that uses a Fractional Fac...
Enda Ridge, Daniel Kudenko