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IASTEDSEA
2004
15 years 3 months ago
Higher-order strategic programming: A road to software assurance
Program transformation through the repeated application of simple rewrite rules is conducive to formal verification. In practice, program transformation oftentimes requires data t...
Victor L. Winter, Steve Roach, Fares Fraij
129
Voted
BMCBI
2008
152views more  BMCBI 2008»
15 years 2 months ago
JCoast - A biologist-centric software tool for data mining and comparison of prokaryotic (meta)genomes
Background: Current sequencing technologies give access to sequence information for genomes and metagenomes at a tremendous speed. Subsequent data processing is mainly performed b...
Michael Richter, Thierry Lombardot, Ivaylo Kostadi...
IPPS
2007
IEEE
15 years 8 months ago
Software and Algorithms for Graph Queries on Multithreaded Architectures
Search-based graph queries, such as finding short paths and isomorphic subgraphs, are dominated by memory latency. If input graphs can be partitioned appropriately, large cluster...
Jonathan W. Berry, Bruce Hendrickson, Simon Kahan,...
BMCBI
2006
122views more  BMCBI 2006»
15 years 2 months ago
BioMoby extensions to the Taverna workflow management and enactment software
Background: As biology becomes an increasingly computational science, it is critical that we develop software tools that support not only bioinformaticians, but also bench biologi...
Edward A. Kawas, Martin Senger, Mark D. Wilkinson
ICDE
2004
IEEE
133views Database» more  ICDE 2004»
16 years 3 months ago
GenExplore: Interactive Exploration of Gene Interactions from Microarray Data
DNA Microarray provides a powerful basis for analysis of gene expression. Data mining methods such as clustering have been widely applied to microarray data to link genes that sho...
Yong Ye, Xintao Wu, Kalpathi R. Subramanian, Liyin...