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» Extended formulations in combinatorial optimization
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149
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APPROX
2010
Springer
188views Algorithms» more  APPROX 2010»
15 years 5 months ago
Approximation Algorithms for Reliable Stochastic Combinatorial Optimization
We consider optimization problems that can be formulated as minimizing the cost of a feasible solution wT x over an arbitrary combinatorial feasible set F {0, 1}n . For these pro...
Evdokia Nikolova
149
Voted
ALMOB
2006
138views more  ALMOB 2006»
15 years 3 months ago
A combinatorial optimization approach for diverse motif finding applications
Background: Discovering approximately repeated patterns, or motifs, in biological sequences is an important and widely-studied problem in computational molecular biology. Most fre...
Elena Zaslavsky, Mona Singh
FSTTCS
2009
Springer
15 years 10 months ago
Iterative Methods in Combinatorial Optimization
We describe a simple iterative method for proving a variety of results in combinatorial optimization. It is inspired by Jain’s iterative rounding method (FOCS 1998) for designing...
R. Ravi
133
Voted
FUIN
2010
109views more  FUIN 2010»
15 years 2 months ago
Combinatorial Optimization Solutions for the Maximum Quartet Consistency Problem
Given a set of taxa S and a complete set of quartet topologies Q over S, the problem of determining a phylogeny that satisfies the maximum number of topologies is called the Maxi...
António Morgado, João Marques-Silva
135
Voted
CCE
2008
15 years 3 months ago
Informative gene selection and design of regulatory networks using integer optimization
A central problem in bioinformatics and systems biology is the selection of appropriate models in a rational and systematic way. This fundamentally combinatorial problem can be re...
Eric Yang, Timothy Maguire, Martin L. Yarmush, Ioa...