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ALMOB
2006
155views more  ALMOB 2006»
14 years 12 months ago
Refining motifs by improving information content scores using neighborhood profile search
The main goal of the motif finding problem is to detect novel, over-represented unknown signals in a set of sequences (e.g. transcription factor binding sites in a genome). The mo...
Chandan K. Reddy, Yao-Chung Weng, Hsiao-Dong Chian...
ENGL
2008
95views more  ENGL 2008»
14 years 12 months ago
Formation of Sink Vortices in a Jet Engine Test Cell
Vortices can be produced and ingested into the intake of a jet engine during high power operation in the vicinity of solid surfaces causing Foreign Object Damage (FOD) or compresso...
Wei Hua Ho, Mark Jermy, Henry Dumbleton
BMCBI
2006
142views more  BMCBI 2006»
14 years 11 months ago
Correlated fragile site expression allows the identification of candidate fragile genes involved in immunity and associated with
Background: Common fragile sites (cfs) are specific regions in the human genome that are particularly prone to genomic instability under conditions of replicative stress. Several ...
Angela Re, Davide Corà, Alda Maria Puliti, ...
BMCBI
2006
100views more  BMCBI 2006»
14 years 11 months ago
Using the nucleotide substitution rate matrix to detect horizontal gene transfer
Background: Horizontal gene transfer (HGT) has allowed bacteria to evolve many new capabilities. Because transferred genes perform many medically important functions, such as conf...
Micah Hamady, M. D. Betterton, Rob Knight
BMCBI
2006
137views more  BMCBI 2006»
14 years 11 months ago
Bounded search for de novo identification of degenerate cis-regulatory elements
Background: The identification of statistically overrepresented sequences in the upstream regions of coregulated genes should theoretically permit the identification of potential ...
Jonathan M. Carlson, Arijit Chakravarty, Radhika S...
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