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ALMOB
2006
110views more  ALMOB 2006»
15 years 3 months ago
New journal: Algorithms for Molecular Biology
This editorial announces Algorithms for Molecular Biology, a new online open access journal published by BioMed Central. By launching the first open access journal on algorithmic ...
Burkhard Morgenstern, Peter F. Stadler
BMCBI
2006
146views more  BMCBI 2006»
15 years 3 months ago
A database application for pre-processing, storage and comparison of mass spectra derived from patients and controls
Background: Statistical comparison of peptide profiles in biomarker discovery requires fast, userfriendly software for high throughput data analysis. Important features are flexib...
Mark K. Titulaer, Ivar Siccama, Lennard J. Dekker,...
141
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BMCBI
2007
149views more  BMCBI 2007»
15 years 3 months ago
SAMPI: Protein Identification with Mass Spectra Alignments
Background: Mass spectrometry based peptide mass fingerprints (PMFs) offer a fast, efficient, and robust method for protein identification. A protein is digested (usually by tryps...
Hans-Michael Kaltenbach, Andreas Wilke, Sebastian ...
151
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BMCBI
2005
94views more  BMCBI 2005»
15 years 3 months ago
YANA - a software tool for analyzing flux modes, gene-expression and enzyme activities
Background: A number of algorithms for steady state analysis of metabolic networks have been developed over the years. Of these, Elementary Mode Analysis (EMA) has proven especial...
Roland Schwarz, Patrick Musch, Axel von Kamp, Bern...
FSTTCS
2009
Springer
15 years 10 months ago
Kernels for Feedback Arc Set In Tournaments
A tournament T = (V, A) is a directed graph in which there is exactly one arc between every pair of distinct vertices. Given a digraph on n vertices and an integer parameter k, th...
Stéphane Bessy, Fedor V. Fomin, Serge Gaspe...