This paper introduces a new family of string classifiers based on local relatedness. We use three types of local relatedness measurements, namely, longest common substrings (LCStr&...
In this paper we explore, from an algorithmic point of view, the extent to which the facial angles and combinatorial structure of a convex polyhedron determine the polyhedron—in ...
The String Barcoding (SBC) problem, introduced by Rash and Gusfield (RECOMB, 2002), consists in finding a minimum set of substrings that can be used to distinguish between all mem...
If one wishes to find out whether a computational problem over discrete data is solvable or how complex it is, the classical approach is to represent the discrete objects in quest...
We study two pattern matching problems that are motivated by applications in computational biology. In the Closest Substring problem k strings s1, . . ., sk are given, and the tas...