Background: Discovering approximately repeated patterns, or motifs, in biological sequences is an important and widely-studied problem in computational molecular biology. Most fre...
The discovery of subsets with special properties from binary data has been one of the key themes in pattern discovery. Pattern classes such as frequent itemsets stress the co-occu...
Eino Hinkkanen, Hannes Heikinheimo, Heikki Mannila...
— In this paper, we propose a system for finding partial positive and negative coregulated gene clusters in microarray data. Genes are clustered together if they show the same p...
In Sequential Viterbi Models, such as HMMs, MEMMs, and Linear Chain CRFs, the type of patterns over output sequences that can be learned by the model depend directly on the model...
In many domains, decision makers want to find and understand patterns of events as these patterns often give insight into the causal relationships among events. Current systems to...