Sciweavers

81 search results - page 4 / 17
» Finding recurrent sources in sequences
Sort
View
BMCBI
2008
86views more  BMCBI 2008»
14 years 11 months ago
Is plant mitochondrial RNA editing a source of phylogenetic incongruence? An answer from in silico and in vivo data sets
Background: In plant mitochondria, the post-transcriptional RNA editing process converts C to U at a number of specific sites of the mRNA sequence and usually restores phylogeneti...
Ernesto Picardi, Carla Quagliariello
JCB
2006
126views more  JCB 2006»
14 years 11 months ago
Combinatorics of Saturated Secondary Structures of RNA
Following Zuker (1986), a saturated secondary structure for a given RNA sequence is a secondary structure such that no base pair can be added without violating the definition of s...
P. Clote
CPM
2000
Springer
143views Combinatorics» more  CPM 2000»
15 years 4 months ago
Explaining and Controlling Ambiguity in Dynamic Programming
Abstract. Ambiguity in dynamic programming arises from two independent sources, the non-uniqueness of optimal solutions and the particular recursion scheme by which the search spac...
Robert Giegerich
BMCBI
2006
160views more  BMCBI 2006»
14 years 11 months ago
Gene prediction in eukaryotes with a generalized hidden Markov model that uses hints from external sources
Background: In order to improve gene prediction, extrinsic evidence on the gene structure can be collected from various sources of information such as genome-genome comparisons an...
Mario Stanke, Oliver Schöffmann, Burkhard Mor...
OOPSLA
2005
Springer
15 years 5 months ago
Finding application errors and security flaws using PQL: a program query language
A number of effective error detection tools have been built in recent years to check if a program conforms to certain design rules. An important class of design rules deals with s...
Michael C. Martin, V. Benjamin Livshits, Monica S....