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» From Data Flow Networks to Process Algebras
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BMCBI
2010
191views more  BMCBI 2010»
14 years 10 months ago
BiGG: a Biochemical Genetic and Genomic knowledgebase of large scale metabolic reconstructions
Background: Genome-scale metabolic reconstructions under the Constraint Based Reconstruction and Analysis (COBRA) framework are valuable tools for analyzing the metabolic capabili...
Jan Schellenberger, Junyoung O. Park, Tom M. Conra...
BMCBI
2007
182views more  BMCBI 2007»
14 years 9 months ago
Hybrid elementary flux analysis/nonparametric modeling: application for bioprocess control
Background: The progress in the "-omic" sciences has allowed a deeper knowledge on many biological systems with industrial interest. This knowledge is still rarely used ...
Ana P. Teixeira, Carlos Alves, Paula M. Alves, Man...
EUROSYS
2010
ACM
15 years 3 months ago
PUSH: A Dataflow Shell
The deluge of huge data sets such as those provided by sensor networks, online transactions, and the web provide exciting opportunities for data analysis. The scale of the data ...
Noah Evans, Eric Van Hensbergen
NDSS
2005
IEEE
15 years 3 months ago
One-Way Isolation: An Effective Approach for Realizing Safe Execution Environments
In this paper, we present an approach for realizing a safe execution environment (SEE) that enables users to “try out” new software (or configuration changes to existing soft...
Weiqing Sun, Zhenkai Liang, V. N. Venkatakrishnan,...
BMCBI
2010
118views more  BMCBI 2010»
14 years 10 months ago
Walk-weighted subsequence kernels for protein-protein interaction extraction
Background: The construction of interaction networks between proteins is central to understanding the underlying biological processes. However, since many useful relations are exc...
Seonho Kim, Juntae Yoon, Jihoon Yang, Seog Park