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» GENOME: a rapid coalescent-based whole genome simulator
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BIOINFORMATICS
2007
48views more  BIOINFORMATICS 2007»
15 years 23 days ago
GENOME: a rapid coalescent-based whole genome simulator
Liming Liang, Sebastian Zöllner, Gonça...
BMCBI
2011
14 years 4 months ago
Improving pan-genome annotation using whole genome multiple alignment
Background: Rapid annotation and comparisons of genomes from multiple isolates (pan-genomes) is becoming commonplace due to advances in sequencing technology. Genome annotations c...
Samuel V. Angiuoli, Julie C. Dunning Hotopp, Steve...
APBC
2004
15 years 2 months ago
A Rapid Method of Whole Genome Visualisation Illustrating Features in Both Coding and Non-coding Regions
The application of Fourier analysis to a genome can be used as an indicator of gene coding regions. We have developed a visualisation of the Fourier spectra that allows convenient...
Ross Hall, Linda Stern
RECOMB
2012
Springer
13 years 3 months ago
A Model for Biased Fractionation after Whole Genome Duplication
Background: Paralog reduction, the loss of duplicate genes after whole genome duplication (WGD) is a pervasive process. Whether this loss proceeds gene by gene or through deletion...
David Sankoff, Chunfang Zheng, Baoyong Wang
110
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BMCBI
2004
154views more  BMCBI 2004»
15 years 16 days ago
Base-By-Base: Single nucleotide-level analysis of whole viral genome alignments
Background: With ever increasing numbers of closely related virus genomes being sequenced, it has become desirable to be able to compare two genomes at a level more detailed than ...
Ryan Brodie, Alex J. Smith, Rachel L. Roper, Vasil...