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» Gene Expression Data Management: A Case Study
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RECOMB
2009
Springer
16 years 15 days ago
Evaluating Between-Pathway Models with Expression Data
Abstract. Between-Pathway Models (BPMs) are network motifs consisting of pairs of putative redundant pathways. In this paper, we show how adding another source of high-throughput d...
Benjamin J. Hescott, Mark D. M. Leiserson, Lenore ...
IJCSA
2008
237views more  IJCSA 2008»
14 years 12 months ago
Development of A SOLAP Patrimony Management Application System: Fez Medina as a Case Study
It is well known that transactional and analytical systems each require different database architecture. In general, the database structure of transactional systems is optimized f...
I. Salam, M. El Mohajir, A. Taleb, B. El Mohajir
BMCBI
2010
214views more  BMCBI 2010»
15 years 15 hour ago
AutoSOME: a clustering method for identifying gene expression modules without prior knowledge of cluster number
Background: Clustering the information content of large high-dimensional gene expression datasets has widespread application in "omics" biology. Unfortunately, the under...
Aaron M. Newman, James B. Cooper
ALMOB
2006
135views more  ALMOB 2006»
14 years 12 months ago
P-value based visualization of codon usage data
Two important and not yet solved problems in bacterial genome research are the identification of horizontally transferred genes and the prediction of gene expression levels. Both ...
Peter Meinicke, Thomas Brodag, Wolfgang Florian Fr...
BMCBI
2004
115views more  BMCBI 2004»
14 years 11 months ago
Quantifying the relationship between co-expression, co-regulation and gene function
Background: It is thought that genes with similar patterns of mRNA expression and genes with similar functions are likely to be regulated via the same mechanisms. It has been diff...
Dominic J. Allocco, Isaac S. Kohane, Atul J. Butte